quartz/content/Obsidian Vault/dna replication, short tandem repeats.md
2022-06-07 14:39:39 -06:00

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#bio

short tandem repeat

#card/reverse repeating patterns found in dna. Using the number of instances that a small sample is repeated can be used for dna analysis in order to figure out crime scenes and such. ^1654056403856

replicating dna

semiconservative model

idk, seems like the legit way that dna is actually replicated, as opposed to the conservative model and the dispersive model. looks like !Pasted image 20220531221547.png

primase ::: molecule primer, initiates the construction of new dna. creates rna primer. ^1654057167325 DNA polymerase ::: an enzyme for making dna. uses primer and parental dna to match up new dna nucleotides to make a new dna strand. ^1654057167331 helicase ::: unzips both sides of the dna molecule. You can only go from 5' to 3'. only in one direction.

  • leading strand goes in the right direction
  • lagging strand has to go back and forth, since it's backwards.

thermal cycler

ingredients for lab dna reading in a thermal cycler.

  • h20
  • dna
  • primer
  • nucleotides
  • polymerase

the cycler heats the dna up to get it seperate, then cools it down in a cylce that does a great job of breaking stuff up and letting you exponentially copy the dna. You can just sequence the dna like in STRs, or you can put it in an agar gel, and turn on an electric charge. Short fragments go fast, long dna goes slow.

dna difference detection.

You have to cut the dna into different fragments by using a tool to cut at molecular palindromes. !Pasted image 20220531223334.png

Some dna is cut differently, like so:!Pasted image 20220531223415.png You'll see dna like this: !Pasted image 20220531223446.png You can thus see that the dna is different. The suspect has a really short piece that the crime scene dna doesn't have.

The scissors are called restriction enzymes. The analysis used is called RFLP ::: Restriction Fragment Length Polymorphisms, you're looking for palindromes, where either side of the dna is the reverse of the other.